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Mitochondrial Peptide Pair

$109.99

The Mitochondrial Peptide Pair supplies MOTS-c and SS-31 as matched 10 mg research vials. The two peptides share an organelle rather than a mechanism: MOTS-c is a sixteen-residue peptide encoded within mitochondrial DNA that signals outward to the nucleus, while SS-31 is a synthetic tetrapeptide designed to concentrate at the inner mitochondrial membrane. Supplied lyophilized. For research use only.

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Mitochondrial Peptide Pair
Product Profile

Overview

The Mitochondrial Peptide Pair brings together two compounds routinely grouped as mitochondrial peptides, at matched 10 mg mass. The grouping describes a location rather than a mechanism, and the two peptides differ in almost every other respect.

MOTS-c is a mitochondrial-derived peptide — a sixteen-residue sequence encoded within the 12S rRNA region of mitochondrial DNA. It is produced inside the mitochondrion and studied as a retrograde signal, influencing nuclear gene expression through the folate-methionine cycle and AMPK activation.

SS-31, also known as elamipretide, is a synthetic aromatic-cationic tetrapeptide. It originates outside the cell entirely and is studied for its association with cardiolipin at the inner mitochondrial membrane. Where MOTS-c signals outward, SS-31 is designed to move inward toward the organelle.

The two also differ in scale. A sixteen-residue peptide and a four-residue peptide behave differently in solubility, stability and handling, and SS-31’s compact alternating structure is itself the basis of its mitochondrial targeting.

Researchers should note that SS-31 and elamipretide are the same compound, and that elamipretide received FDA accelerated approval in September 2025. Material supplied here is research-grade and is not that approved product. No published study has examined the two peptides together.

For Research Use Only. Not intended for human consumption, therapeutic use, veterinary use, or diagnostic applications.

The Mitochondrial Peptide Pair is a two-vial research set containing MOTS-c and SS-31, both at 10 mg. MOTS-c is a sixteen-residue peptide encoded in mitochondrial DNA that signals outward to the nucleus. SS-31, also called elamipretide, is a synthetic tetrapeptide that associates with cardiolipin at the inner mitochondrial membrane. The two share an organelle rather than a mechanism.

Key Takeaways

  • The Mitochondrial Peptide Pair contains one MOTS-c vial and one SS-31 vial, both at 10 mg, supplied lyophilized.
  • MOTS-c is encoded within the 12S rRNA region of mitochondrial DNA and is studied as a retrograde signal from mitochondrion to nucleus.
  • SS-31 is a synthetic aromatic-cationic tetrapeptide studied for its association with cardiolipin at the inner mitochondrial membrane.
  • The two peptides are grouped by the organelle they relate to, not by a shared mechanism, and they act in opposite directions relative to it.
  • SS-31 and elamipretide are the same compound; elamipretide received FDA accelerated approval in September 2025 for a rare genetic condition.
  • No published study has examined MOTS-c and SS-31 together, and both are supplied strictly for laboratory research.

What’s Included in This Research Pair

CompoundMassAlso known asOriginWhy it is included
MOTS-c10 mgMitochondrial ORF of the 12S rRNA type-cEncoded in mitochondrial DNAMitochondrial-derived peptide studied as an outbound metabolic signal
SS-3110 mgElamipretide, MTP-131SyntheticTetrapeptide studied for association with the inner mitochondrial membrane

Both vials are supplied as lyophilized powder with batch documentation.

Why MOTS-c and SS-31 Are Compared

MOTS-c and SS-31 are frequently grouped together as mitochondrial peptides. That grouping names a location rather than a mechanism, and the two compounds are less alike than the label suggests.

One is encoded by the mitochondrion; the other is designed to reach it

MOTS-c originates inside the mitochondrion. Its sixteen-residue sequence is encoded within the 12S rRNA region of mitochondrial DNA — not in the nuclear genome. MOTS-c is therefore an endogenous product of the organelle itself, studied as a signal that travels outward and influences nuclear gene expression.

SS-31 originates outside biology entirely. It is a synthetic tetrapeptide designed to accumulate at the inner mitochondrial membrane, where it associates with cardiolipin. Nothing produces SS-31 naturally; it is a targeting agent constructed to reach a compartment.

The two therefore move in opposite directions relative to the same organelle. One is an outbound signal. The other is an inbound targeting molecule. A researcher expecting complementary action from compounds sharing a category label should note that the label describes where they are relevant, not how they work.

A signalling peptide and a membrane-associating peptide

The mechanistic classes differ as much as the origins do.

MOTS-c is studied as a metabolic signalling peptide, with research attention on the folate-methionine cycle and downstream AMPK activation — a transcriptional and metabolic route with effects distributed across the cell.

SS-31 is studied for a biophysical association with a specific membrane lipid. Research interest concerns what that association does to inner-membrane organisation and electron transport chain behaviour, rather than a signalling cascade.

Signalling and membrane association are not competing explanations of one effect. They are different kinds of process, examined with different methods and different endpoints.

What the grouping actually meansThese two compounds are grouped anatomically, not evidentially. Holding both at matched mass makes that distinction testable under identical preparation conditions rather than inferred from separate published studies.
Aviso de InvestigaciónTodos los productos de cada categoría son únicamente para uso en investigación y no aptos para uso humano o veterinario, diagnóstico o tratamiento.
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READ

(preguntas frecuentes)

Preguntas Frecuentes

01

What is included in the Mitochondrial Peptide Pair?

The pair includes one MOTS-c vial at 10 mg and one SS-31 vial at 10 mg, both supplied lyophilized with batch documentation. The two compounds are matched in mass to support comparison under identical preparation conditions. For research use only.
02

What is the difference between MOTS-c and SS-31?

MOTS-c is a sixteen-residue peptide encoded in mitochondrial DNA that signals outward to the nucleus. SS-31 is a synthetic four-residue peptide that associates with cardiolipin at the inner mitochondrial membrane. They differ in origin, size, mechanism class and the direction they act relative to the organelle.
03

Are MOTS-c and SS-31 the same type of peptide?

No. MOTS-c is a mitochondrial-derived peptide, encoded within mitochondrial DNA and produced endogenously. SS-31 is a synthetic aromatic-cationic tetrapeptide with no natural counterpart. The shared description "mitochondrial peptide" refers to the organelle they relate to, not to a shared class or mechanism.
04

Is SS-31 the same as elamipretide?

Yes. SS-31, elamipretide and MTP-131 all refer to the same compound. The multiple designations reflect its development history across research and clinical settings. Researchers encountering these names in separate sources are reading about one molecule.
05

Is elamipretide FDA approved?

Yes. Elamipretide received FDA accelerated approval on 19 September 2025 as FORZINITY, marketed by Stealth BioTherapeutics under NDA 215244, for Barth syndrome. Many currently published sources still describe it as unapproved, a characterisation that was accurate before September 2025.
06

Does the elamipretide approval apply to this research material?

No. Material supplied here is research-grade and is not the approved pharmaceutical product. It carries no approved indication, is not manufactured or released to pharmaceutical standards, and is supplied strictly for laboratory research. An approval granted to a sponsor does not extend to research reagents.
07

Is MOTS-c approved anywhere?

No. MOTS-c has no approved status in any jurisdiction and remains an investigational compound. Published research is predominantly preclinical, with no completed human efficacy trial reported.
08

Is MOTS-c encoded by mitochondrial DNA?

Yes. MOTS-c is encoded within the 12S rRNA region of mitochondrial DNA rather than in the nuclear genome, which is what classifies it as a mitochondrial-derived peptide. This distinguishes it from peptides that are nuclear-encoded and imported into the mitochondrion.
09

What does SS-31 bind to?

SS-31 is studied for its association with cardiolipin, a phospholipid largely confined to the inner mitochondrial membrane and associated with cristae organisation and electron transport chain function. The compound's alternating aromatic-cationic structure underlies its concentration at this membrane.
10

Have MOTS-c and SS-31 been studied together?

No published study has examined the two compounds together. Research exists on each separately. Any expectation about combined behaviour is an extrapolation rather than a reported finding, and the pair supplies materials for investigation rather than a validated combination.
11

Why does SS-31 appear under several different names?

SS-31 was developed across research and clinical programmes, acquiring designations at different stages — SS-31 in early research, MTP-131 in development, and elamipretide as the assigned non-proprietary name. Material should be confirmed by identity testing rather than by designation alone.
12

What dosing information is available for these compounds?

None. Both are supplied for laboratory research only, and no dosing, administration or protocol guidance is provided. This applies to SS-31 despite elamipretide's approval — approved-product prescribing information describes a different, pharmaceutical-grade product and has no application to research material.
13

What should be verified on the certificate of analysis?

Confirm identity, purity and lot number for each vial. Identity confirmation matters particularly for SS-31 given its multiple designations. Note that a sixteen-residue peptide and a tetrapeptide present different synthesis challenges, so purity figures are not directly comparable between the two.
14

Can these compounds be used on humans or animals?

No. Both vials are supplied for laboratory research only. They are not intended for human consumption, therapeutic use, veterinary use, or diagnostic applications, and no dosing, protocol or administration guidance is provided for them.